Pseudomonas syringae pv. syringae B728a, Psyr_0421

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0421
Name
Replicon chromosome
Genomic location 460420 - 461310 (+ strand)

Cross-References

RefSeq YP_233529.1
GI 66043688
Entrez 3365897
INSDC AAY35491.1
NCBI Locus Tag Psyr_0421
UniParc UPI000050D672
UniProtKB Acc Q4ZZD1
UniProtKB ID Q4ZZD1_PSEU2
UniRef100 UniRef100_Q4ZZD1
UniRef50 UniRef50_Q48PF5
UniRef90 UniRef90_Q48PF5

Product

Feature Type CDS
Coding Frame 1
Product Name
regulatory protein LysR
Synonyms
Evidence for Translation
Charge (pH 7) -6.06
Kyte-Doolittle Hydrophobicity Value 0.159
Molecular Weight (kDa) 32351.9
Isoelectric Point (pI) 5.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 545 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003437 (1043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0421

Human Homologs

References

No references are associated with this feature.