Pseudomonas sp. WCS374, PD374_RS19410

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas sp. WCS374
GCF_000698295.1|latest
Locus Tag
PD374_RS19410
NCBI Old Locus TagPD374_07850
Name
Synonym: PD374_07850
Replicon chromosome
Genomic location 1698399 - 1701560 (- strand)

Cross-References

RefSeq WP_014717302.1
GI 504530200
NCBI Locus Tag PD374_RS19410
NCBI Old Locus Tag PD374_07850

Product

Feature Type CDS
Coding Frame 1
Product Name
multidrug transporter
Synonyms
Evidence for Translation
Charge (pH 7) -5.37
Kyte-Doolittle Hydrophobicity Value 0.297
Molecular Weight (kDa) 112.7
Isoelectric Point (pI) 5.85

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
adeF AdeF is the membrane fusion protein of the multidrug efflux complex AdeFGH. [PMID:20696879] ARO:3000777 protein homolog model Strict 773.9 42.48 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000417 (2093 members)
Putative Inparalogs 1 predicted inparalogs
multidrug transporter (PD374_RS09885) 74.7% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PD374_RS19410

Human Homologs

References

No references are associated with this feature.