Pseudomonas syringae pv. syringae B728a, Psyr_0022

Gene Feature Overview

Strain	Pseudomonas syringae pv. syringae B728a (Feil et al., 2005) GCF_000012245.1|latest
Locus Tag	Psyr_0022
Name
Replicon	chromosome
Genomic location	25978 - 26535 (+ strand)

Cross-References

RefSeq	YP_233134.1
GI	66043293
Entrez	3365497
INSDC	AAY35096.1
NCBI Locus Tag	Psyr_0022
UniParc	UPI0000394EE0
UniProtKB Acc	Q500S6
UniProtKB ID	TSAC_PSEU2
UniRef100	UniRef100_Q500S6
UniRef50	UniRef50_Q88B46
UniRef90	UniRef90_Q88B46

Product

Feature Type	CDS
Coding Frame	1
Product Name	SUA5/yciO/yrdC, N-terminal
Synonyms
Evidence for Translation
Charge (pH 7)	-0.35
Kyte-Doolittle Hydrophobicity Value	-0.070
Molecular Weight (kDa)	20.5
Isoelectric Point (pI)	6.79

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 638 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000022 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Psyr_0022 Search term: SUA5/yciO/yrdC, N-terminal

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000362135 yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905] E-value: 4.8e-08 Percent Identity: 27.9

References