Pseudomonas chlororaphis EA105, NZ35_RS09900

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas chlororaphis EA105
GCF_000783395.1|latest
Locus Tag
NZ35_RS09900
NCBI Old Locus TagNZ35_09910
Name
Synonym: NZ35_09910
Replicon contig_5
Genomic location 87873 - 90272 (+ strand)

Cross-References

RefSeq WP_038361346.1
GI 740575549
INSDC KHA73482.1
NCBI Locus Tag NZ35_RS09900
NCBI Old Locus Tag NZ35_09910
UniParc UPI0005391522
UniProtKB Acc A0A0A6DFL1
UniProtKB ID A0A0A6DFL1_9PSED
UniRef100 UniRef100_A0A0A6DFL1
UniRef50 UniRef50_I7C8Q0
UniRef90 UniRef90_W6V0C6

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent receptor
Synonyms
Evidence for Translation
Charge (pH 7) -15.79
Kyte-Doolittle Hydrophobicity Value -0.372
Molecular Weight (kDa) 86.6
Isoelectric Point (pI) 4.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003507 (512 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: NZ35_RS09900

Human Homologs

References

No references are associated with this feature.