Pseudomonas chlororaphis EA105, NZ35_RS21425

Gene Feature Overview

Strain	Pseudomonas chlororaphis EA105 GCF_000783395.1|latest
Locus Tag	NZ35_RS21425
NCBI Old Locus Tag	NZ35_21445
Name	Synonym: NZ35_21445
Replicon	contig_24
Genomic location	19534 - 19977 (- strand)

Cross-References

RefSeq	WP_038366222.1
GI	740580448
INSDC	KHA71182.1
NCBI Locus Tag	NZ35_RS21425
NCBI Old Locus Tag	NZ35_21445
UniParc	UPI000537B169
UniProtKB Acc	A0A0A6D8X5
UniProtKB ID	A0A0A6D8X5_9PSED
UniRef100	UniRef100_A0A0A6D8X5
UniRef50	UniRef50_Q3KAQ7
UniRef90	UniRef90_J2MKD8

Product

Feature Type	CDS
Coding Frame	1
Product Name	type VI secretion protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.28
Kyte-Doolittle Hydrophobicity Value	-0.624
Molecular Weight (kDa)	16.7
Isoelectric Point (pI)	6.81

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003155 (331 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: NZ35_RS21425 Search term: type VI secretion protein

Human Homologs

References