Pseudomonas chlororaphis EA105, NZ35_RS20420

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas chlororaphis EA105
GCF_000783395.1|latest
Locus Tag
NZ35_RS20420
NCBI Old Locus TagNZ35_20440
Name
Synonym: NZ35_20440
Replicon contig_23
Genomic location 6379 - 8856 (- strand)

Cross-References

RefSeq WP_038365692.1
GI 740579916
INSDC KHA71280.1
NCBI Locus Tag NZ35_RS20420
NCBI Old Locus Tag NZ35_20440
UniParc UPI00053699E7
UniProtKB Acc A0A0A6D7V6
UniProtKB ID A0A0A6D7V6_9PSED
UniRef100 UniRef100_A0A0A6D7V6
UniRef50 UniRef50_Q08017
UniRef90 UniRef90_J2T5H3

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent receptor
Synonyms
Evidence for Translation
Charge (pH 7) -12.18
Kyte-Doolittle Hydrophobicity Value -0.385
Molecular Weight (kDa) 89.2
Isoelectric Point (pI) 5.08

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001486 (1037 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: NZ35_RS20420

Human Homologs

References

No references are associated with this feature.