Pseudomonas chlororaphis EA105, NZ35_RS06235

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas chlororaphis EA105
GCF_000783395.1|latest
Locus Tag
NZ35_RS06235
NCBI Old Locus TagNZ35_06235
Name
Synonym: NZ35_06235
Replicon contig_2
Genomic location 520105 - 521415 (- strand)

Cross-References

RefSeq WP_038359590.1
GI 740573789
INSDC KHA74667.1
NCBI Locus Tag NZ35_RS06235
NCBI Old Locus Tag NZ35_06235
UniParc UPI0005385A89
UniProtKB Acc A0A0A6DIX4
UniProtKB ID A0A0A6DIX4_9PSED
UniRef100 UniRef100_A0A0A6DIX4
UniRef50 UniRef50_Q4KKR1
UniRef90 UniRef90_Q4KKR1

Product

Feature Type CDS
Coding Frame 1
Product Name
16S rRNA methyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) 1.94
Kyte-Doolittle Hydrophobicity Value -0.111
Molecular Weight (kDa) 47.6
Isoelectric Point (pI) 7.50

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000017 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: NZ35_RS06235

Human Homologs

Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.5e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.5e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.5e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.5e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.5e-28
Percent Identity: 31.8
Ensembl 110, assembly GRCh38.p14
NOP2 nucleolar protein [Source:HGNC Symbol;Acc:HGNC:7867]
E-value: 1.5e-28
Percent Identity: 31.8

References

No references are associated with this feature.