Pseudomonas chlororaphis EA105, NZ35_RS05500
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas chlororaphis EA105
GCF_000783395.1|latest |
| Locus Tag |
NZ35_RS05500
|
| NCBI Old Locus Tag | NZ35_05500 |
| Name |
Synonym: NZ35_05500 |
| Replicon | contig_2 |
| Genomic location | 350306 - 350446 (- strand) |
Cross-References
| RefSeq | WP_007920296.1 |
| GI | 495195506 |
| NCBI Locus Tag | NZ35_RS05500 |
| NCBI Old Locus Tag | NZ35_05500 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
type VI secretion protein
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 2.16 |
| Kyte-Doolittle Hydrophobicity Value | -0.224 |
| Molecular Weight (kDa) | 5.1 |
| Isoelectric Point (pI) | 8.77 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003719 (396 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: NZ35_RS05500
Search term: type VI secretion protein
|
Human Homologs
References
No references are associated with this feature.