Pseudomonas putida HB3267, B479_21725

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_21725
Name
Replicon chromosome
Genomic location 4781140 - 4783194 (+ strand)

Cross-References

RefSeq YP_007231177.1
GI 431804274
Entrez 14290725
INSDC AGA75234.1
NCBI Locus Tag B479_21725
UniParc UPI0002A16C99
UniProtKB Acc L0FMQ2
UniProtKB ID L0FMQ2_PSEPU
UniRef100 UniRef100_A0A099N5Z9
UniRef50 UniRef50_D7I4A9
UniRef90 UniRef90_T2H1B7

Product

Feature Type CDS
Coding Frame 1
Product Name
diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -13.52
Kyte-Doolittle Hydrophobicity Value -0.243
Molecular Weight (kDa) 77.6
Isoelectric Point (pI) 5.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 450 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003960 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_21725

Human Homologs

References

No references are associated with this feature.