Pseudomonas putida HB3267, B479_21620

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_21620
Name
Replicon chromosome
Genomic location 4760947 - 4761525 (- strand)

Cross-References

RefSeq YP_007231156.1
GI 431804253
Entrez 14290704
INSDC AGA75213.1
NCBI Locus Tag B479_21620
UniParc UPI0002A17261
UniProtKB Acc L0FQC1
UniProtKB ID L0FQC1_PSEPU
UniRef100 UniRef100_L0FQC1
UniRef50 UniRef50_I3R4A3
UniRef90 UniRef90_R9V601

Product

Feature Type CDS
Coding Frame 1
Product Name
PfpI family intracellular peptidase
Synonyms
Evidence for Translation
Charge (pH 7) -5.45
Kyte-Doolittle Hydrophobicity Value 0.133
Molecular Weight (kDa) 20782.7
Isoelectric Point (pI) 5.54

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 404 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000346 (1222 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_21620

Human Homologs

References

No references are associated with this feature.