Pseudomonas putida HB3267, B479_19230

Gene Feature Overview

Strain	Pseudomonas putida HB3267 GCF_000325725.1|latest
Locus Tag	B479_19230
Name
Replicon	chromosome
Genomic location	4239109 - 4240059 (+ strand)

Cross-References

RefSeq	YP_007230681.1
GI	431803778
Entrez	14290229
INSDC	AGA74738.1
NCBI Locus Tag	B479_19230
UniParc	UPI0002173CC5
UniProtKB Acc	L0FNY8
UniProtKB ID	L0FNY8_PSEPU
UniRef100	UniRef100_A0A099N471
UniRef50	UniRef50_Q9I3S3
UniRef90	UniRef90_Q9I3S3

Product

Feature Type	CDS
Coding Frame	1
Product Name	agmatinase
Synonyms
Evidence for Translation
Charge (pH 7)	-10.26
Kyte-Doolittle Hydrophobicity Value	0.016
Molecular Weight (kDa)	34.4
Isoelectric Point (pI)	5.34

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession	Header	Accession Date	Compound	Source	Resolution	Method	Percent Identity
3NIO	HYDROLASE	06/16/10	Crystal structure of Pseudomonas aeruginosa guanidinobutyrase	Pseudomonas aeruginosa	2	X-RAY DIFFRACTION	90.9

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 436 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001341 (475 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: B479_19230 Search term: agmatinase

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000364986 agmatinase [Source:HGNC Symbol;Acc:HGNC:18407] E-value: 3.4e-115 Percent Identity: 63.6

References