Pseudomonas aeruginosa 3575, AJ62_03987
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa 3575
GCF_000629285.1|latest |
| Locus Tag |
AJ62_03987
|
| Name |
|
| Replicon | adTyh-supercont1.13 |
| Genomic location | 119932 - 121428 (+ strand) |
Cross-References
| RefSeq | WP_031634192.1 |
| GI | 685892965 |
| NCBI Locus Tag | AJ62_03987 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
RND transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.08 |
| Kyte-Doolittle Hydrophobicity Value | -0.223 |
| Molecular Weight (kDa) | 53.8 |
| Isoelectric Point (pI) | 5.01 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AMR gene predictions from CARD database
Identified using the Resistance Gene Identifier (RGI)
| Model Name | Definition | Accession | Model Type (?) | SNP | Cutoff | Bit Score | Percent Identity | CARD Version |
| OpmB | OpmB is an outer membrane efflux protein in Pseudomonas aeruginosa that shows functional cooperation with MuxABC, to form the efflux pump system MuxABC-OpmB. [PMID:12445646] | ARO:3004072 | protein homolog model | Strict | 938.3 | 99.6 | 3.2.5 |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG003040 (534 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: AJ62_03987
Search term: RND transporter
|
Human Homologs
References
No references are associated with this feature.