Pseudomonas putida HB3267, B479_06890

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida HB3267
GCF_000325725.1|latest
Locus Tag
B479_06890
Name
Replicon chromosome
Genomic location 1541996 - 1543333 (+ strand)

Cross-References

RefSeq YP_007228237.1
GI 431801334
Entrez 14287785
INSDC AGA72294.1
NCBI Locus Tag B479_06890
UniParc UPI0002A15F64
UniProtKB Acc L0FEM1
UniProtKB ID L0FEM1_PSEPU
UniRef100 UniRef100_L0FEM1
UniRef50 UniRef50_C3KAZ7
UniRef90 UniRef90_L0FEM1

Product

Feature Type CDS
Coding Frame 1
Product Name
chain length determinant protein
Synonyms
Evidence for Translation
Charge (pH 7) 2.20
Kyte-Doolittle Hydrophobicity Value -0.052
Molecular Weight (kDa) 48964.9
Isoelectric Point (pI) 8.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 6 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000904 (708 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: B479_06890

Human Homologs

References

No references are associated with this feature.