Pseudomonas aeruginosa BWH054, V555_03899

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa BWH054
GCF_000629505.1|latest
Locus Tag
V555_03899
Name
Replicon adTyv-supercont1.3
Genomic location 441556 - 442989 (+ strand)

Cross-References

RefSeq WP_003140343.1
GI 489232021
NCBI Locus Tag V555_03899

Product

Feature Type CDS
Coding Frame 1
Product Name
multidrug transporter MatE
Synonyms
Evidence for Translation
Charge (pH 7) 13.31
Kyte-Doolittle Hydrophobicity Value 0.642
Molecular Weight (kDa) 50.8
Isoelectric Point (pI) 10.05

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AMR gene predictions from CARD database

Identified using the Resistance Gene Identifier (RGI)

Model Name Definition Accession Model Type (?) SNP Cutoff Bit Score Percent Identity CARD Version
PmpM PmpM is a multidrug efflux pump belonging to the MATE family of Pseudomonas aeruginosa. PmpM is an H+ drug antiporter and is the first reported case of an H+ coupled efflux pump in the MATE family. PmpM confers resistance to fluoroquinolones, fradiomycin, benzalkonium chloride, chlorhexidine gluconate, ethidium bromide, tetraphenylphosphonium chloride (TPPCl), and rhodamine 6G. [PMID:14679249] ARO:3004077 protein homolog model Strict 922.2 99.58 3.2.5

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001295 (965 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: V555_03899

Human Homologs

References

No references are associated with this feature.