Pseudomonas aeruginosa JMM, RLJV_28625
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas aeruginosa JMM
GCF_000709285.1|latest |
| Locus Tag |
RLJV_28625
|
| Name |
|
| Replicon | contig052 |
| Genomic location | 300264 - 302258 (- strand) |
Cross-References
| RefSeq | WP_023910070.1 |
| GI | 565825474 |
| NCBI Locus Tag | RLJV_28625 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
DNA primase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.74 |
| Kyte-Doolittle Hydrophobicity Value | -0.558 |
| Molecular Weight (kDa) | 74.1 |
| Isoelectric Point (pI) | 7.11 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
PDB 3D Structures
| Accession | Header | Accession Date | Compound | Source | Resolution | Method | Percent Identity |
| 5VAZ | TRANSFERASE | 03/28/17 | Crystal structure of a DNA primase domain from Pseudomonas aeruginosa | Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) | 2.4 | X-RAY DIFFRACTION | 99.5 |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000560 (536 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: RLJV_28625
Search term: DNA primase
|
Human Homologs
References
No references are associated with this feature.