Pseudomonas putida BIRD-1, PPUBIRD1_2911

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida BIRD-1
GCF_000183645.1|latest
Locus Tag
PPUBIRD1_2911
Name
Replicon chromosome
Genomic location 3271473 - 3272051 (+ strand)

Cross-References

RefSeq YP_005930728.1
GI 386012451
Entrez 12521092
NCBI Locus Tag PPUBIRD1_2911

Product

Feature Type CDS
Coding Frame 1
Product Name
Oxidoreductase, putative
Synonyms
Evidence for Translation
Charge (pH 7) 8.37
Kyte-Doolittle Hydrophobicity Value -0.230
Molecular Weight (kDa) 22.2
Isoelectric Point (pI) 9.92

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 206 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000820 (1495 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPUBIRD1_2911

Human Homologs

Ensembl 110, assembly GRCh38.p14
N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
E-value: 3.0e-13
Percent Identity: 26.1
Ensembl 110, assembly GRCh38.p14
N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
E-value: 3.0e-13
Percent Identity: 26.1
Ensembl 110, assembly GRCh38.p14
N-ribosyldihydronicotinamide:quinone reductase 2 [Source:HGNC Symbol;Acc:HGNC:7856]
E-value: 3.0e-13
Percent Identity: 26.1

References

No references are associated with this feature.