Pseudomonas sp. RIT357, BW43_RS00465 (rimO)

Gene Feature Overview

Strain	Pseudomonas sp. RIT357 GCF_000632245.1|latest
Locus Tag	BW43_RS00465
NCBI Old Locus Tag	BW43_05524
Name	rimO Synonym: BW43_05524
Replicon	contigs9
Genomic location	178688 - 180028 (+ strand)

Cross-References

RefSeq	WP_032891752.1
GI	696316342
INSDC	EZP62495.1
NCBI Locus Tag	BW43_RS00465
NCBI Old Locus Tag	BW43_05524
UniParc	UPI0004456474
UniProtKB Acc	A0A031IPT6
UniProtKB ID	A0A031IPT6_9PSED
UniRef100	UniRef100_A0A031IPT6
UniRef50	UniRef50_A8AIT5
UniRef90	UniRef90_Q4KHA5

Product

Feature Type	CDS
Coding Frame	1
Product Name	ribosomal protein S12 methylthiotransferase
Synonyms
Evidence for Translation
Charge (pH 7)	-15.15
Kyte-Doolittle Hydrophobicity Value	-0.127
Molecular Weight (kDa)	49.7
Isoelectric Point (pI)	4.84

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000882 (537 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BW43_RS00465 Search term: rimO Search term: ribosomal protein S12 methylthiotransferase

Human Homologs

References