Pseudomonas putida S16, PPS_4392

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_4392
Name
Replicon	chromosome
Genomic location	4970306 - 4971403 (- strand)

Cross-References

RefSeq	YP_004703805.1
GI	339489277
Entrez	10940008
INSDC	AEJ14925.1
NCBI Locus Tag	PPS_4392
UniParc	UPI0002173ABC
UniProtKB Acc	F8G5B6
UniProtKB ID	F8G5B6_PSEP6
UniRef100	UniRef100_A0A099N5L1
UniRef50	UniRef50_Q5E4L7
UniRef90	UniRef90_Q1I581

Product

Feature Type	CDS
Coding Frame	1
Product Name	polar amino acid ABC transporter inner membrane subunit
Synonyms
Evidence for Translation
Charge (pH 7)	12.82
Kyte-Doolittle Hydrophobicity Value	0.730
Molecular Weight (kDa)	40.5
Isoelectric Point (pI)	9.99

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 444 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001275 (1254 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_4392 Search term: polar amino acid ABC transporter inner membrane subunit

Human Homologs

References