Pseudomonas sp. RIT357, BW43_RS23040

Gene Feature Overview

Strain	Pseudomonas sp. RIT357 GCF_000632245.1|latest
Locus Tag	BW43_RS23040
NCBI Old Locus Tag	BW43_00842
Name	Synonym: BW43_00842
Replicon	contigs10
Genomic location	271151 - 273256 (+ strand)

Cross-References

RefSeq	WP_032884722.1
GI	696309251
INSDC	EZP68851.1
NCBI Locus Tag	BW43_RS23040
NCBI Old Locus Tag	BW43_00842
UniParc	UPI00044F8235
UniProtKB Acc	A0A031J6H4
UniProtKB ID	A0A031J6H4_9PSED
UniRef100	UniRef100_A0A031J6H4
UniRef50	UniRef50_P41121
UniRef90	UniRef90_A4XYD6

Product

Feature Type	CDS
Coding Frame	1
Product Name	polynucleotide phosphorylase/polyadenylase
Synonyms
Evidence for Translation
Charge (pH 7)	-16.14
Kyte-Doolittle Hydrophobicity Value	-0.020
Molecular Weight (kDa)	74.9
Isoelectric Point (pI)	4.96

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG004385 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: BW43_RS23040 Search term: polynucleotide phosphorylase/polyadenylase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000393953 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 4.6e-112 Percent Identity: 36.0
Ensembl 110, assembly GRCh38.p14	ENSP00000400646 polyribonucleotide nucleotidyltransferase 1 [Source:HGNC Symbol;Acc:HGNC:23166] E-value: 4.6e-112 Percent Identity: 36.0

References