Pseudomonas putida S16, PPS_4107

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4107
Name
Replicon chromosome
Genomic location 4654681 - 4657266 (+ strand)

Cross-References

RefSeq YP_004703526.1
GI 339488998
Entrez 10939729
INSDC AEJ14646.1
NCBI Locus Tag PPS_4107
UniParc UPI0002173213
UniProtKB Acc F8G1W2
UniProtKB ID F8G1W2_PSEP6
UniRef100 UniRef100_A0A099N4R2
UniRef50 UniRef50_A0A0B7D8W4
UniRef90 UniRef90_V9V4C8

Product

Feature Type CDS
Coding Frame 1
Product Name
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7) -17.38
Kyte-Doolittle Hydrophobicity Value -0.200
Molecular Weight (kDa) 95.6
Isoelectric Point (pI) 5.44

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 464 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003381 (443 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4107

Human Homologs

References

No references are associated with this feature.