Pseudomonas putida S16, PPS_4035

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_4035
Name
Replicon chromosome
Genomic location 4558329 - 4561208 (+ strand)

Cross-References

RefSeq YP_004703456.1
GI 339488928
Entrez 10939659
INSDC AEJ14576.1
NCBI Locus Tag PPS_4035
UniParc UPI00021740EF
UniProtKB Acc F8G0J8
UniProtKB ID F8G0J8_PSEP6
UniRef100 UniRef100_A0A099N551
UniRef50 UniRef50_Q886B0
UniRef90 UniRef90_Q886B0

Product

Feature Type CDS
Coding Frame 1
Product Name
ribonucleotide-diphosphate reductase subunit alpha
Synonyms
Evidence for Translation
Charge (pH 7) -12.92
Kyte-Doolittle Hydrophobicity Value -0.300
Molecular Weight (kDa) 107.0
Isoelectric Point (pI) 5.80

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 609 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001115 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_4035

Human Homologs

Ensembl 110, assembly GRCh38.p14
ribonucleotide reductase catalytic subunit M1 [Source:HGNC Symbol;Acc:HGNC:10451]
E-value: 1.6e-155
Percent Identity: 41.3

References

No references are associated with this feature.