Pseudomonas putida S16, PPS_3939

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_3939
Name
Replicon	chromosome
Genomic location	4456867 - 4458909 (+ strand)

Cross-References

RefSeq	YP_004703360.1
GI	339488832
Entrez	10939563
INSDC	AEJ14480.1
NCBI Locus Tag	PPS_3939
UniParc	UPI0002173EDA
UniProtKB Acc	F8FZ56
UniProtKB ID	F8FZ56_PSEP6
UniRef100	UniRef100_F8FZ56
UniRef50	UniRef50_Q4KGJ9
UniRef90	UniRef90_F8FZ56

Product

Feature Type	CDS
Coding Frame	1
Product Name	oligopeptidase B
Synonyms
Evidence for Translation
Charge (pH 7)	-30.32
Kyte-Doolittle Hydrophobicity Value	-0.311
Molecular Weight (kDa)	76.0
Isoelectric Point (pI)	4.63

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 333 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001247 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_3939 Search term: oligopeptidase B

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000439626 prolyl endopeptidase like [Source:HGNC Symbol;Acc:HGNC:30228] E-value: 2.1e-53 Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14	ENSP00000260648 prolyl endopeptidase like [Source:HGNC Symbol;Acc:HGNC:30228] E-value: 2.1e-53 Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14	ENSP00000386543 prolyl endopeptidase like [Source:HGNC Symbol;Acc:HGNC:30228] E-value: 2.1e-53 Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14	ENSP00000409480 prolyl endopeptidase like [Source:HGNC Symbol;Acc:HGNC:30228] E-value: 2.1e-53 Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14	ENSP00000387241 prolyl endopeptidase like [Source:HGNC Symbol;Acc:HGNC:30228] E-value: 2.1e-53 Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14	ENSP00000386509 prolyl endopeptidase like [Source:HGNC Symbol;Acc:HGNC:30228] E-value: 2.1e-53 Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14	ENSP00000391456 prolyl endopeptidase like [Source:HGNC Symbol;Acc:HGNC:30228] E-value: 2.1e-53 Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14	ENSP00000386909 prolyl endopeptidase like [Source:HGNC Symbol;Acc:HGNC:30228] E-value: 2.1e-53 Percent Identity: 29.3
Ensembl 110, assembly GRCh38.p14	ENSP00000387095 prolyl endopeptidase like [Source:HGNC Symbol;Acc:HGNC:30228] E-value: 2.1e-53 Percent Identity: 29.3

References