Pseudomonas putida S16, PPS_3845

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3845
Name
Replicon chromosome
Genomic location 4340452 - 4341117 (- strand)

Cross-References

RefSeq YP_004703266.1
GI 339488738
Entrez 10939469
INSDC AEJ14386.1
NCBI Locus Tag PPS_3845
UniParc UPI0002173BBE
UniProtKB Acc F8FWM1
UniProtKB ID F8FWM1_PSEP6
UniRef100 UniRef100_F8FWM1
UniRef50 UniRef50_A0A0B7D8M5
UniRef90 UniRef90_I7C9P8

Product

Feature Type CDS
Coding Frame 1
Product Name
Sua5/YciO/YrdC/YwlC family protein
Synonyms
Evidence for Translation
Charge (pH 7) -4.44
Kyte-Doolittle Hydrophobicity Value -0.176
Molecular Weight (kDa) 24.8
Isoelectric Point (pI) 5.89

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 626 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002416 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3845

Human Homologs

References

No references are associated with this feature.