Pseudomonas putida S16, PPS_3773

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_3773
Name
Replicon chromosome
Genomic location 4256305 - 4257660 (- strand)

Cross-References

RefSeq YP_004703194.1
GI 339488666
Entrez 10939397
INSDC AEJ14314.1
NCBI Locus Tag PPS_3773
UniParc UPI0002173992
UniProtKB Acc F8FVA0
UniProtKB ID F8FVA0_PSEP6
UniRef100 UniRef100_F8FVA0
UniRef50 UniRef50_Q4KG71
UniRef90 UniRef90_Q88ET2

Product

Feature Type CDS
Coding Frame 1
Product Name
two component sigma-54 specific Fis family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -7.16
Kyte-Doolittle Hydrophobicity Value -0.088
Molecular Weight (kDa) 49228.0
Isoelectric Point (pI) 5.56

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 627 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001060 (494 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_3773

Human Homologs

References

No references are associated with this feature.