Pseudomonas putida S16, PPS_3547

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_3547
Name
Replicon	chromosome
Genomic location	3991242 - 3992852 (+ strand)

Cross-References

RefSeq	YP_004702972.1
GI	339488444
Entrez	10939175
INSDC	AEJ14092.1
NCBI Locus Tag	PPS_3547
UniParc	UPI00021732F3
UniProtKB Acc	F8FSJ3
UniProtKB ID	F8FSJ3_PSEP6
UniRef100	UniRef100_F8FSJ3
UniRef50	UniRef50_Q5LMM9
UniRef90	UniRef90_V6JEF6

Product

Feature Type	CDS
Coding Frame	1
Product Name	peptide ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	6.43
Kyte-Doolittle Hydrophobicity Value	-0.120
Molecular Weight (kDa)	59498.5
Isoelectric Point (pI)	8.12

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003590 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_3547 Search term: peptide ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000513710 transporter 1, ATP binding cassette subfamily B member [Source:HGNC Symbol;Acc:HGNC:43] E-value: 5.1e-18 Percent Identity: 30.4

References