Pseudomonas putida S16, PPS_3485

Gene Feature Overview

Strain	Pseudomonas putida S16 GCF_000219705.1|latest
Locus Tag	PPS_3485
Name
Replicon	chromosome
Genomic location	3925857 - 3926642 (- strand)

Cross-References

RefSeq	YP_004702912.1
GI	339488384
Entrez	10939115
INSDC	AEJ14032.1
NCBI Locus Tag	PPS_3485
UniParc	UPI00021730DA
UniProtKB Acc	F8G664
UniProtKB ID	F8G664_PSEP6
UniRef100	UniRef100_A0A099N1A6
UniRef50	UniRef50_C3KMI6
UniRef90	UniRef90_F0ED14

Product

Feature Type	CDS
Coding Frame	1
Product Name	amino acid ABC transporter periplasmic amino acid-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	1.21
Kyte-Doolittle Hydrophobicity Value	0.130
Molecular Weight (kDa)	27.5
Isoelectric Point (pI)	8.42

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 418 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001211 (994 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PPS_3485 Search term: amino acid ABC transporter periplasmic amino acid-binding protein

Human Homologs

References