Pseudomonas putida S16, PPS_2643

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2643
Name
Replicon chromosome
Genomic location 2942638 - 2943960 (- strand)

Cross-References

RefSeq YP_004702078.1
GI 339487550
Entrez 10938281
INSDC AEJ13198.1
NCBI Locus Tag PPS_2643
UniParc UPI0002173A50
UniProtKB Acc F8FTP7
UniProtKB ID F8FTP7_PSEP6
UniRef100 UniRef100_A0A099MZ08
UniRef50 UniRef50_Q4K705
UniRef90 UniRef90_B0KSG1

Product

Feature Type CDS
Coding Frame 1
Product Name
amino acid permease family protein
Synonyms
Evidence for Translation
Charge (pH 7) 5.54
Kyte-Doolittle Hydrophobicity Value 0.842
Molecular Weight (kDa) 47.5
Isoelectric Point (pI) 8.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 454 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2643

Human Homologs

Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value: 6.4e-11
Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value: 6.4e-11
Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value: 6.4e-11
Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value: 6.4e-11
Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value: 6.4e-11
Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value: 6.4e-11
Percent Identity: 25.3
Ensembl 110, assembly GRCh38.p14
solute carrier family 7 member 7 [Source:HGNC Symbol;Acc:HGNC:11065]
E-value: 6.4e-11
Percent Identity: 25.3

References

No references are associated with this feature.