Pseudomonas syringae pv. actinidiae ICMP 9617, A250_RS00875
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas syringae pv. actinidiae ICMP 9617
GCF_000658965.1|latest |
| Locus Tag |
A250_RS00875
|
| NCBI Old Locus Tag | A250_26046 |
| Name |
Synonym: A250_26046 |
| Replicon | chromosome Chr |
| Genomic location | 6263980 - 6265209 (+ strand) |
Cross-References
| RefSeq | WP_003378254.1 |
| GI | 489473178 |
| NCBI Locus Tag | A250_RS00875 |
| NCBI Old Locus Tag | A250_26046 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 7.34 |
| Kyte-Doolittle Hydrophobicity Value | 1.053 |
| Molecular Weight (kDa) | 41.7 |
| Isoelectric Point (pI) | 9.67 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG001091 (306 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: A250_RS00875
Search term: transporter
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
major facilitator superfamily domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16894]
E-value:
2.9e-05
Percent Identity:
30.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
major facilitator superfamily domain containing 10 [Source:HGNC Symbol;Acc:HGNC:16894]
E-value:
2.9e-05
Percent Identity:
30.7
|
References
No references are associated with this feature.