Pseudomonas putida S16, PPS_2534

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_2534
Name
Replicon chromosome
Genomic location 2833909 - 2834508 (- strand)

Cross-References

RefSeq YP_004701973.1
GI 339487445
Entrez 10938176
INSDC AEJ13093.1
NCBI Locus Tag PPS_2534
UniParc UPI0002173734
UniProtKB Acc F8FSF5
UniProtKB ID F8FSF5_PSEP6
UniRef100 UniRef100_F8FSF5
UniRef50 UniRef50_Q4KD74
UniRef90 UniRef90_Q88IY1

Product

Feature Type CDS
Coding Frame 1
Product Name
XRE family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) -4.57
Kyte-Doolittle Hydrophobicity Value -0.369
Molecular Weight (kDa) 22090.4
Isoelectric Point (pI) 5.57

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 331 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000519 (777 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_2534

Human Homologs

References

No references are associated with this feature.