Pseudomonas syringae pv. actinidiae ICMP 9617, A250_RS09375

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. actinidiae ICMP 9617
GCF_000658965.1|latest
Locus Tag
A250_RS09375
NCBI Old Locus TagA250_17188
Name
Synonym: A250_17188
Replicon chromosome Chr
Genomic location 4162681 - 4163457 (- strand)

Cross-References

RefSeq WP_003378745.1
GI 489473669
NCBI Locus Tag A250_RS09375
NCBI Old Locus Tag A250_17188

Product

Feature Type CDS
Coding Frame 1
Product Name
flagellar biosynthesis protein FliR
Synonyms
Evidence for Translation
Charge (pH 7) 0.46
Kyte-Doolittle Hydrophobicity Value 1.082
Molecular Weight (kDa) 27.9
Isoelectric Point (pI) 7.70

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Flagellar
Note: This is based on PSORTb V3.0 secondary localization prediction
 Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6S3R PROTEIN TRANSPORT 06/25/19 Structure of the FliPQR complex from the flagellar type 3 secretion system of Pseudomonas savastanoi. Pseudomonas savastanoi pv. phaseolicola; Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) 3.5 ELECTRON MICROSCOPY 97.7

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001365 (533 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: A250_RS09375

Human Homologs

References

No references are associated with this feature.