Pseudomonas putida S16, PPS_1882

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1882
Name
Replicon chromosome
Genomic location 2108884 - 2109525 (+ strand)

Cross-References

RefSeq YP_004701331.1
GI 339486803
Entrez 10937534
INSDC AEJ12451.1
NCBI Locus Tag PPS_1882
UniParc UPI000000F244
UniProtKB Acc F8FXG2
UniProtKB ID F8FXG2_PSEP6
UniRef100 UniRef100_A5W635
UniRef50 UniRef50_Q9I2U1
UniRef90 UniRef90_B0KJG6

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent Clp protease, proteolytic subunit
Synonyms
Evidence for Translation
Charge (pH 7) -3.90
Kyte-Doolittle Hydrophobicity Value -0.135
Molecular Weight (kDa) 23.5
Isoelectric Point (pI) 5.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003596 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1882

Human Homologs

Ensembl 110, assembly GRCh38.p14
caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:HGNC:2084]
E-value: 6.6e-62
Percent Identity: 58.8

References

No references are associated with this feature.