Pseudomonas putida S16, PPS_1425
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida S16
GCF_000219705.1|latest |
| Locus Tag |
PPS_1425
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 1575560 - 1576660 (- strand) |
Cross-References
| RefSeq | YP_004700880.1 |
| GI | 339486352 |
| Entrez | 10937083 |
| NCBI Locus Tag | PPS_1425 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
dTDP-glucose 4,6-dehydratase
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | -8.02 |
| Kyte-Doolittle Hydrophobicity Value | -0.282 |
| Molecular Weight (kDa) | 40627.4 |
| Isoelectric Point (pI) | 5.89 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 644 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004752 (533 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PPS_1425
Search term: dTDP-glucose 4,6-dehydratase
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]
E-value:
1.5e-13
Percent Identity:
28.7
|
|
Ensembl
110, assembly
GRCh38.p14
|
UDP-galactose-4-epimerase [Source:HGNC Symbol;Acc:HGNC:4116]
E-value:
1.5e-13
Percent Identity:
28.7
|
References
No references are associated with this feature.