Pseudomonas putida S16, PPS_1424

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida S16
GCF_000219705.1|latest
Locus Tag
PPS_1424
Name
Replicon chromosome
Genomic location 1574661 - 1575563 (- strand)

Cross-References

RefSeq YP_004700879.1
GI 339486351
Entrez 10937082
INSDC AEJ11999.1
NCBI Locus Tag PPS_1424
UniParc UPI000217390E
UniProtKB Acc F8G3R0
UniProtKB ID F8G3R0_PSEP6
UniRef100 UniRef100_F8G3R0
UniRef50 UniRef50_Q2SYI1
UniRef90 UniRef90_R9V2E3

Product

Feature Type CDS
Coding Frame 1
Product Name
dTDP-4-dehydrorhamnose reductase
Synonyms
Evidence for Translation
Charge (pH 7) -1.35
Kyte-Doolittle Hydrophobicity Value -0.041
Molecular Weight (kDa) 32260.4
Isoelectric Point (pI) 6.64

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 490 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004753 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PPS_1424

Human Homologs

Ensembl 110, assembly GRCh38.p14
methionine adenosyltransferase 2B [Source:HGNC Symbol;Acc:HGNC:6905]
E-value: 7.2e-14
Percent Identity: 39.3
Ensembl 110, assembly GRCh38.p14
methionine adenosyltransferase 2B [Source:HGNC Symbol;Acc:HGNC:6905]
E-value: 7.2e-14
Percent Identity: 39.3
Ensembl 110, assembly GRCh38.p14
methionine adenosyltransferase 2B [Source:HGNC Symbol;Acc:HGNC:6905]
E-value: 7.2e-14
Percent Identity: 39.3
Ensembl 110, assembly GRCh38.p14
methionine adenosyltransferase 2B [Source:HGNC Symbol;Acc:HGNC:6905]
E-value: 7.2e-14
Percent Identity: 39.3

References

No references are associated with this feature.