Pseudomonas putida GB-1, PputGB1_4554

Gene Feature Overview

Strain	Pseudomonas putida GB-1 GCF_000019125.1|latest
Locus Tag	PputGB1_4554
Name
Replicon	chromosome
Genomic location	5089179 - 5090648 (+ strand)

Cross-References

RefSeq	YP_001670776.1
GI	167035545
Entrez	5872362
INSDC	ABZ00441.1
NCBI Locus Tag	PputGB1_4554
UniParc	UPI0000F24EEA
UniProtKB Acc	B0KGP5
UniProtKB ID	B0KGP5_PSEPG
UniRef100	UniRef100_B0KGP5
UniRef50	UniRef50_Q887N8
UniRef90	UniRef90_B1J179

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent RNA helicase RhlB
Synonyms
Evidence for Translation
Charge (pH 7)	6.82
Kyte-Doolittle Hydrophobicity Value	-0.404
Molecular Weight (kDa)	54108.7
Isoelectric Point (pI)	8.97

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 612 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001808 (534 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PputGB1_4554 Search term: ATP-dependent RNA helicase RhlB

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000493819 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000493475 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000495377 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000486443 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000487224 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000392494 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000496524 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000496663 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000486720 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000496052 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000486306 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000486516 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000478443 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000494518 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000487062 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000494040 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000496222 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000486514 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8
Ensembl 110, assembly GRCh38.p14	ENSP00000382840 DEAD-box helicase 3 X-linked [Source:HGNC Symbol;Acc:HGNC:2745] E-value: 8.3e-60 Percent Identity: 35.8

References