Pseudomonas putida GB-1, PputGB1_4342

Gene Feature Overview

Strain	Pseudomonas putida GB-1 GCF_000019125.1|latest
Locus Tag	PputGB1_4342
Name
Replicon	chromosome
Genomic location	4858116 - 4858862 (+ strand)

Cross-References

RefSeq	YP_001670566.1
GI	167035335
Entrez	5872149
INSDC	ABZ00231.1
NCBI Locus Tag	PputGB1_4342
UniParc	UPI00005FD695
UniProtKB Acc	B0KUG5
UniProtKB ID	B0KUG5_PSEPG
UniRef100	UniRef100_B0KUG5
UniRef50	UniRef50_P0AER4
UniRef90	UniRef90_I7C1P8

Product

Feature Type	CDS
Coding Frame	1
Product Name	polar amino acid ABC transporter inner membrane subunit
Synonyms
Evidence for Translation
Charge (pH 7)	0.92
Kyte-Doolittle Hydrophobicity Value	0.612
Molecular Weight (kDa)	27.5
Isoelectric Point (pI)	8.16

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 444 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001276 (497 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PputGB1_4342 Search term: polar amino acid ABC transporter inner membrane subunit

Human Homologs

References