Pseudomonas putida GB-1, PputGB1_2166
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas putida GB-1
GCF_000019125.1|latest |
| Locus Tag |
PputGB1_2166
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 2413874 - 2415214 (+ strand) |
Cross-References
| RefSeq | YP_001668403.1 |
| GI | 167033172 |
| Entrez | 5869955 |
| NCBI Locus Tag | PputGB1_2166 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
major facilitator superfamily transporter
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 14.55 |
| Kyte-Doolittle Hydrophobicity Value | 0.951 |
| Molecular Weight (kDa) | 46667.2 |
| Isoelectric Point (pI) | 10.91 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results |
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 398 genera
|
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG004525 (370 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: PputGB1_2166
Search term: major facilitator superfamily transporter
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
SV2 related protein [Source:HGNC Symbol;Acc:HGNC:25417]
E-value:
1.2e-20
Percent Identity:
26.4
|
References
No references are associated with this feature.