Pseudomonas putida GB-1, PputGB1_1643

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas putida GB-1
GCF_000019125.1|latest
Locus Tag
PputGB1_1643
Name
Replicon chromosome
Genomic location 1861657 - 1862274 (- strand)

Cross-References

RefSeq YP_001667882.1
GI 167032651
Entrez 5869422
INSDC ABY97546.1
NCBI Locus Tag PputGB1_1643
UniParc UPI0000F25A80
UniProtKB Acc B0KGC5
UniProtKB ID B0KGC5_PSEPG
UniRef100 UniRef100_B0KGC5
UniRef50 UniRef50_Q88L34
UniRef90 UniRef90_Q88L34

Product

Feature Type CDS
Coding Frame 1
Product Name
two component LuxR family transcriptional regulator
Synonyms
Evidence for Translation
Charge (pH 7) 3.13
Kyte-Doolittle Hydrophobicity Value 0.098
Molecular Weight (kDa) 23028.8
Isoelectric Point (pI) 8.68

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 623 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000034 (777 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PputGB1_1643

Human Homologs

References

No references are associated with this feature.