Pseudomonas aeruginosa PA14, CIA_04100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas aeruginosa PA14 - Assembly GCF_000404265.1
GCF_000404265.1|latest
Locus Tag
CIA_04100
Name
Replicon scaffold_1
Genomic location 4525259 - 4526284 (- strand)

Cross-References

RefSeq WP_003093184.1
GI 489183746
INSDC CDI92476.1
NCBI Locus Tag CIA_04100
UniParc UPI000039624A
UniProtKB Acc W0YV15
UniProtKB ID W0YV15_PSEAI
UniRef100 UniRef100_W0YV15
UniRef50 UniRef50_Q9X6V6
UniRef90 UniRef90_Q9X6V6

Product

Feature Type CDS
Coding Frame 1
Product Name
putative lipoprotein, rlpA family
Synonyms
Evidence for Translation
Charge (pH 7) 13.37
Kyte-Doolittle Hydrophobicity Value -0.211
Molecular Weight (kDa) 36.4
Isoelectric Point (pI) 10.10

Subcellular localization

Individual Mappings
Localization Confidence PMID
Periplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
6I05 CELL CYCLE 10/25/18 Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa Pseudomonas aeruginosa 1.213 X-RAY DIFFRACTION 100.0
6I0N CELL CYCLE 10/26/18 Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with denuded glycan ended in anhNAM Pseudomonas aeruginosa 1.4 X-RAY DIFFRACTION 100.0
6I09 CELL CYCLE 10/25/18 Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with denuded glycan obtained by soaking Pseudomonas aeruginosa 1.48 X-RAY DIFFRACTION 100.0
6I0A CELL CYCLE 10/25/18 Crystal structure of RlpA SPOR domain from Pseudomonas aeruginosa in complex with nuded glycan obtained by co-crystallization Pseudomonas aeruginosa 1.3 X-RAY DIFFRACTION 100.0

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001683 (530 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: CIA_04100

Human Homologs

References

No references are associated with this feature.