Pseudomonas fluorescens SBW25, PFLU5906

Gene Feature Overview

Strain	Pseudomonas fluorescens SBW25 GCF_000009225.2|latest
Locus Tag	PFLU5906
Name
Replicon	chromosome
Genomic location	6462036 - 6462767 (+ strand)

Cross-References

RefSeq	YP_002875392.1
GI	229593273
Entrez	7817450
INSDC	CAY53379.1
UniParc	UPI00019DAFB6
UniProtKB Acc	C3K3Z6
UniProtKB ID	C3K3Z6_PSEFS
UniRef100	UniRef100_C3K3Z6
UniRef50	UniRef50_P39456
UniRef90	UniRef90_D7HUT5

Product

Feature Type	CDS
Coding Frame	1
Product Name	putative ABC transporter ATP-binding protein
Synonyms
Evidence for Translation
Charge (pH 7)	-0.35
Kyte-Doolittle Hydrophobicity Value	-0.043
Molecular Weight (kDa)	26747.8
Isoelectric Point (pI)	6.89

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001207 (452 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFLU5906 Search term: putative ABC transporter ATP-binding protein

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000478255 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 8.7e-26 Percent Identity: 37.3
Ensembl 110, assembly GRCh38.p14	ENSP00000444095 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 8.7e-26 Percent Identity: 37.3
Ensembl 110, assembly GRCh38.p14	ENSP00000265724 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 8.7e-26 Percent Identity: 37.3

References