Pseudomonas fluorescens SBW25, PFLU5342

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU5342
Name
Replicon chromosome
Genomic location 5871228 - 5871938 (+ strand)

Cross-References

RefSeq YP_002874841.1
GI 229592722
Entrez 7817347
INSDC CAY52478.1
UniParc UPI00019DAFCD
UniProtKB Acc C3K2E5
UniProtKB ID C3K2E5_PSEFS
UniRef100 UniRef100_C3K2E5
UniRef50 UniRef50_E2XYG3
UniRef90 UniRef90_C3K2E5

Product

Feature Type CDS
Coding Frame 1
Product Name
putative LuxR family regulatory protein
Synonyms
Evidence for Translation
Charge (pH 7) 3.25
Kyte-Doolittle Hydrophobicity Value -0.097
Molecular Weight (kDa) 26.5
Isoelectric Point (pI) 8.13

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 281 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001096 (1439 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU5342

Human Homologs

References

No references are associated with this feature.