Pseudomonas fluorescens SBW25, PFLU4888

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4888
Name
Replicon chromosome
Genomic location 5365023 - 5365886 (- strand)

Cross-References

RefSeq YP_002874394.1
GI 229592275
EC Number 3.2.2.21
Entrez 7820846
INSDC CAY51776.1
UniParc UPI00019DA4D6
UniProtKB Acc C3JYQ2
UniProtKB ID C3JYQ2_PSEFS
UniRef100 UniRef100_C3JYQ2
UniRef50 UniRef50_E2XX04
UniRef90 UniRef90_E2XX04

Product

Feature Type CDS
Coding Frame 1
Product Name
putative DNA-3-methyladenine glycosylase II
Synonyms
Evidence for Translation
Charge (pH 7) -1.28
Kyte-Doolittle Hydrophobicity Value 0.070
Molecular Weight (kDa) 30.8
Isoelectric Point (pI) 6.29

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 264 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003703 (443 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4888

Human Homologs

References

No references are associated with this feature.