Pseudomonas fluorescens SBW25, PFLU4393

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU4393
Name
Replicon chromosome
Genomic location 4859079 - 4859951 (+ strand)

Cross-References

RefSeq YP_002873928.1
GI 229591809
Entrez 7821198
INSDC CAY51034.1
UniParc UPI00019DA653
UniProtKB Acc C3K0F7
UniProtKB ID C3K0F7_PSEFS
UniRef100 UniRef100_C3K0F7
UniRef50 UniRef50_D0CG44
UniRef90 UniRef90_I2BZY9

Product

Feature Type CDS
Coding Frame 1
Product Name
putative short-chain dehydrogenase
Synonyms
Evidence for Translation
Charge (pH 7) -0.66
Kyte-Doolittle Hydrophobicity Value 0.064
Molecular Weight (kDa) 30505.5
Isoelectric Point (pI) 6.86

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 649 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002686 (393 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU4393

Human Homologs

Ensembl 110, assembly GRCh38.p14
peroxisomal trans-2-enoyl-CoA reductase [Source:HGNC Symbol;Acc:HGNC:18281]
E-value: 1.8e-49
Percent Identity: 41.4

References

No references are associated with this feature.