Pseudomonas fluorescens SBW25, PFLU3929 (clpP)

Gene Feature Overview

Strain	Pseudomonas fluorescens SBW25 GCF_000009225.2|latest
Locus Tag	PFLU3929
Name	clpP
Replicon	chromosome
Genomic location	4336285 - 4336920 (- strand)

Cross-References

RefSeq	YP_002873481.1
GI	229591362
Entrez	7818968
INSDC	CAY50311.1
UniParc	UPI00019DA842
UniProtKB Acc	C3JYK0
UniProtKB ID	CLPP_PSEFS
UniRef100	UniRef100_C3JYK0
UniRef50	UniRef50_Q4K9J6
UniRef90	UniRef90_Q4K9J6

Product

Feature Type	CDS
Coding Frame	1
Product Name	ATP-dependent Clp protease proteolytic subunit
Synonyms
Evidence for Translation
Charge (pH 7)	-4.93
Kyte-Doolittle Hydrophobicity Value	-0.130
Molecular Weight (kDa)	23.4
Isoelectric Point (pI)	5.30

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 582 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003596 (535 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFLU3929 Search term: clpP Search term: ATP-dependent Clp protease proteolytic subunit

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000245816 caseinolytic mitochondrial matrix peptidase proteolytic subunit [Source:HGNC Symbol;Acc:HGNC:2084] E-value: 8.9e-59 Percent Identity: 54.7

References