Pseudomonas fluorescens SBW25, PFLU2151 (scoB)

Gene Feature Overview

Strain	Pseudomonas fluorescens SBW25 GCF_000009225.2|latest
Locus Tag	PFLU2151
Name	scoB
Replicon	chromosome
Genomic location	2331156 - 2331815 (- strand)

Cross-References

RefSeq	YP_002871767.1
GI	229589648
EC Number	2.8.3.5
Entrez	7820879
INSDC	CAY48390.1
UniParc	UPI00019D9EBC
UniProtKB Acc	C3K784
UniProtKB ID	C3K784_PSEFS
UniRef100	UniRef100_C3K784
UniRef50	UniRef50_Q4KEA4
UniRef90	UniRef90_Q4KEA4

Product

Feature Type	CDS
Coding Frame	1
Product Name	succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B
Synonyms
Evidence for Translation
Charge (pH 7)	-7.86
Kyte-Doolittle Hydrophobicity Value	0.183
Molecular Weight (kDa)	23471.1
Isoelectric Point (pI)	4.77

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 278 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG003435 (528 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PFLU2151 Search term: scoB Search term: succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000425348 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 1.1e-56 Percent Identity: 52.2
Ensembl 110, assembly GRCh38.p14	ENSP00000196371 3-oxoacid CoA-transferase 1 [Source:HGNC Symbol;Acc:HGNC:8527] E-value: 1.1e-56 Percent Identity: 52.2

References