Pseudomonas fluorescens SBW25, PFLU1195

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU1195
Name
Replicon chromosome
Genomic location 1322976 - 1323626 (+ strand)

Cross-References

RefSeq YP_002870851.1
GI 229588732
Entrez 7820394
INSDC CAY47455.1
UniParc UPI00019DA247
UniProtKB Acc C3KDG5
UniProtKB ID C3KDG5_PSEFS
UniRef100 UniRef100_C3KDG5
UniRef50 UniRef50_Q4KHB4
UniRef90 UniRef90_E2XMJ0

Product

Feature Type CDS
Coding Frame 1
Product Name
putative regulatory protein
Synonyms
Evidence for Translation
Charge (pH 7) -8.07
Kyte-Doolittle Hydrophobicity Value 0.112
Molecular Weight (kDa) 23613.9
Isoelectric Point (pI) 4.69

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 558 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG002070 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU1195

Human Homologs

References

Characterization of the CrbS/R Two-Component System in Pseudomonas fluorescens Reveals a New Set of Genes under Its Control and a DNA Motif Required for CrbR-Mediated Transcriptional Activation.
Sepulveda E, Lupas AN
Front Microbiol 2017;8:2287
PubMed ID: 29250042