Pseudomonas fluorescens SBW25, PFLU1042 (fecI)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU1042
Name
fecI
Replicon chromosome
Genomic location 1154154 - 1154651 (- strand)

Cross-References

RefSeq YP_002870702.1
GI 229588583
Entrez 7820196
INSDC CAY47306.1
UniParc UPI00019D9F9D
UniProtKB Acc C3K5Z5
UniProtKB ID C3K5Z5_PSEFS
UniRef100 UniRef100_C3K5Z5
UniRef50 UniRef50_G8PZ98
UniRef90 UniRef90_C3K5Z5

Product

Feature Type CDS
Coding Frame 1
Product Name
RNA polymerase sigma factor
Synonyms
Evidence for Translation
Charge (pH 7) 1.13
Kyte-Doolittle Hydrophobicity Value -0.039
Molecular Weight (kDa) 18722.5
Isoelectric Point (pI) 7.63

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 208 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000463 (1798 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU1042
Search term: fecI

Human Homologs

References

No references are associated with this feature.