Pseudomonas fluorescens SBW25, PFLU0340 (secB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0340
Name
secB
Replicon chromosome
Genomic location 372183 - 372662 (+ strand)

Cross-References

RefSeq YP_002870020.1
GI 229587901
Entrez 7816433
INSDC CAY46617.1
UniParc UPI00019D9A28
UniProtKB Acc C3K7C1
UniProtKB ID SECB_PSEFS
UniRef100 UniRef100_C3K7C1
UniRef50 UniRef50_Q48C90
UniRef90 UniRef90_C3K7C1

Product

Feature Type CDS
Coding Frame 1
Product Name
preprotein translocase subunit SecB
Synonyms
Evidence for Translation
Charge (pH 7) -9.56
Kyte-Doolittle Hydrophobicity Value -0.124
Molecular Weight (kDa) 17.6
Isoelectric Point (pI) 4.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 216 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004721 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0340
Search term: secB

Human Homologs

References

No references are associated with this feature.