Pseudomonas fluorescens SBW25, PFLU0288

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas fluorescens SBW25
GCF_000009225.2|latest
Locus Tag
PFLU0288
Name
Replicon chromosome
Genomic location 313057 - 313926 (- strand)

Cross-References

RefSeq YP_002869971.1
GI 229587852
Entrez 7821271
INSDC CAY46566.1
UniParc UPI00019D99FD
UniProtKB Acc C3K5U3
UniProtKB ID C3K5U3_PSEFS
UniRef100 UniRef100_C3K5U3
UniRef50 UniRef50_V7DWL1
UniRef90 UniRef90_C3K5U3

Product

Feature Type CDS
Coding Frame 1
Product Name
putative dTDP-4-dehydrorhamnose reductase
Synonyms
Evidence for Translation
Charge (pH 7) -5.93
Kyte-Doolittle Hydrophobicity Value -0.307
Molecular Weight (kDa) 31656.4
Isoelectric Point (pI) 5.81

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 499 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004753 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFLU0288

Human Homologs

References

No references are associated with this feature.