Pseudomonas fluorescens F113, PSF113_4514

Gene Feature Overview

Strain	Pseudomonas fluorescens F113 GCF_000237065.1|latest
Locus Tag	PSF113_4514
Name
Replicon	chromosome
Genomic location	5269135 - 5270262 (+ strand)

Cross-References

RefSeq	YP_005209899.1
GI	378952411
EC Number	3.1.4.46
Entrez	11832617
INSDC	AEV64504.1
NCBI Locus Tag	PSF113_4514
UniParc	UPI00023B4A66
UniProtKB Acc	G8Q6S7
UniProtKB ID	G8Q6S7_PSEFL
UniRef100	UniRef100_G8Q6S7
UniRef50	UniRef50_D7I1J1
UniRef90	UniRef90_G8Q6S7

Product

Feature Type	CDS
Coding Frame	1
Product Name	glycerophosphoryl diester phosphodiesterase
Synonyms
Evidence for Translation
Charge (pH 7)	-1.07
Kyte-Doolittle Hydrophobicity Value	-0.327
Molecular Weight (kDa)	41106.4
Isoelectric Point (pI)	6.74

Subcellular localization

Individual Mappings	Localization Confidence PMID Periplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 379 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000339 (769 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSF113_4514 Search term: glycerophosphoryl diester phosphodiesterase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000414019 glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974] E-value: 8.2e-15 Percent Identity: 40.5
Ensembl 110, assembly GRCh38.p14	ENSP00000444601 glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974] E-value: 8.2e-15 Percent Identity: 40.5
Ensembl 110, assembly GRCh38.p14	ENSP00000363503 glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974] E-value: 8.2e-15 Percent Identity: 40.5
Ensembl 110, assembly GRCh38.p14	ENSP00000445982 glycerophosphodiester phosphodiesterase domain containing 2 [Source:HGNC Symbol;Acc:HGNC:25974] E-value: 8.2e-15 Percent Identity: 40.5

References