Pseudomonas fluorescens F113, PSF113_4026

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens F113
GCF_000237065.1|latest
Locus Tag
PSF113_4026
Name
Replicon chromosome
Genomic location 4741364 - 4743721 (- strand)

Cross-References

RefSeq YP_005209418.1
GI 378951930
EC Number 6.5.1.2
Entrez 11832122
INSDC AEV64023.1
NCBI Locus Tag PSF113_4026
UniParc UPI00023B3C27
UniProtKB Acc G8PZZ7
UniProtKB ID G8PZZ7_PSEFL
UniRef100 UniRef100_G8PZZ7
UniRef50 UniRef50_Q9KTD1
UniRef90 UniRef90_F2KEJ8

Product

Feature Type CDS
Coding Frame 1
Product Name
nad-dependent dna ligase
Synonyms
Evidence for Translation
Charge (pH 7) -19.43
Kyte-Doolittle Hydrophobicity Value -0.178
Molecular Weight (kDa) 85696.8
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 599 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003829 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSF113_4026

Human Homologs

References

No references are associated with this feature.